.editorconfig
AUTHORS
CONTRIBUTING.rst
ChangeLog
DESCRIPTION.rst
HISTORY.rst
LICENSE
MANIFEST.in
README.rst
readthedocs.yml
requirements.txt
setup.cfg
setup.py
tox.ini
.github/workflows/pypi_publish.yml
.github/workflows/test.yml
dev/hessian_errors.ipynb
docs/GUI_autodoc.rst
docs/Makefile
docs/authors.rst
docs/conf.py
docs/contributing.rst
docs/examples.rst
docs/fitting.rst
docs/history.rst
docs/index.rst
docs/installation.rst
docs/make.bat
docs/modules.rst
docs/readme.rst
docs/requirements.txt
docs/_build/latex/pyhdx.pdf
docs/examples/01_basic_usage.ipynb
docs/examples/02_coverage_objects.ipynb
docs/examples/03_fitting.ipynb
docs/examples/04_advanced_fitting.ipynb
docs/examples/04_exporting_output.ipynb
docs/figures/Blocks_original.png
docs/figures/Blocks_reduced.png
docs/figures/fitting_blocks.py
docs/figures/fitting_overfitting.py
docs/figures/fr_orig.npy
docs/figures/fr_red.npy
docs/figures/overfitting.png
images/PyHDX_rgb.png
images/readme_img.png
pyHDX.egg-info/PKG-INFO
pyHDX.egg-info/SOURCES.txt
pyHDX.egg-info/dependency_links.txt
pyHDX.egg-info/not-zip-safe
pyHDX.egg-info/pbr.json
pyHDX.egg-info/requires.txt
pyHDX.egg-info/top_level.txt
pyhdx/__init__.py
pyhdx/fileIO.py
pyhdx/fitting.py
pyhdx/fitting_tf.py
pyhdx/fitting_torch.py
pyhdx/local_cluster.py
pyhdx/math.py
pyhdx/models.py
pyhdx/output.py
pyhdx/plot.py
pyhdx/simulate.py
pyhdx/support.py
pyhdx/panel/apps.py
pyhdx/panel/base.py
pyhdx/panel/controllers.py
pyhdx/panel/data_sources.py
pyhdx/panel/fig_panels.py
pyhdx/panel/golden.html
pyhdx/panel/jinja_base.html
pyhdx/panel/log.py
pyhdx/panel/main_controllers.py
pyhdx/panel/paramdoc.py
pyhdx/panel/serve.py
pyhdx/panel/template.py
pyhdx/panel/theme.py
pyhdx/panel/utils.py
pyhdx/panel/widgets.py
pyhdx/panel/static/extendedgoldentemplate/dark.css
pyhdx/panel/static/extendedgoldentemplate/default.css
pyhdx/panel/static/extendedgoldentemplate/golden.css
pyhdx/panel/static/extendedgoldentemplate/jquery-1.11.1.min.js
pyhdx/panel/static/extendedgoldentemplate/files/latest/css/goldenlayout-base.css
pyhdx/panel/static/extendedgoldentemplate/files/latest/js/goldenlayout.js
tests/dev_gui_secB.py
tests/dev_gui_secB_diff.py
tests/dev_gui_secB_single.py
tests/dev_gui_simulated.py
tests/gen_data.py
tests/gen_secB_testfit_files.py
tests/gen_testfit_files.py
tests/load_gen_data_template.py
tests/load_secb_data_template.py
tests/temp_gen_testdata.py
tests/test_fitting.py
tests/test_gui.py
tests/test_pyhdx.py
tests/test_data/ecSecB_apo.csv
tests/test_data/ecSecB_guess.txt
tests/test_data/ecSecB_torch_fit.txt
tests/test_data/fit_simulated_blocks.pick
tests/test_data/fit_simulated_blocks.txt
tests/test_data/fit_simulated_pfact.pick
tests/test_data/fit_simulated_pfact.txt
tests/test_data/fit_simulated_rates.pick
tests/test_data/fit_simulated_rates.txt
tests/test_data/fit_simulated_torch.pick
tests/test_data/fit_simulated_torch.txt
tests/test_data/fit_simulated_wt_avg.pick
tests/test_data/fit_simulated_wt_avg.txt
tests/test_data/simulated_data.csv
tests/test_data/simulated_data_info.txt
tests/test_data/simulated_data_sequence.txt
tests/test_data/simulated_data_uptake.csv
tests/test_data/simulated_rates.txt